Review




Structured Review

OpGen Inc mapsolver software
Mapsolver Software, supplied by OpGen Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/mapsolver+software/mapsolver+software/pmc03569288-19-14-16
Average 90 stars, based on 1 article reviews
mapsolver software - by Bioz Stars, 2026-11
90/100 stars

Images

Related Articles

Software:

Article Title: Genome Mapping in Plant Comparative Genomics.
Article Snippet: Genomemapping produces fingerprints of DNA sequences to construct a physical map of the whole genome.. It provides contiguous, long-range information that complements and, in some cases, replaces sequencing data.. Recent advances in genome-mapping technology will better allow researchers to detect large (>1 kbp) structural variations between plant genomes.

Article Title: Whole-genome sequence data and analysis of Lactobacillus delbrueckii subsp. lactis ACA-DC 178 isolated from Greek Kasseri cheese
Article Snippet: .. How data were acquired , Genome sequencing: Illumina HiSeq 2000 (Illumina, CA), Denovo sequence assembly: SOAPdenovo v.2.04 software, MapSolver software (OpGen Technologies, Inc., Madison, WI), Bioinformatics approaches: Rapid Annotation using Subsystem Technology (RAST) v.2.0, Prodigal, MetaGeneAnnotator, FGENESB, GenePRIMP pipeline, eggNOG-mapper v.4.5, IslandViewer 4, CRISPRFinder. .. Data format , Raw sequence reads and genome assembly and annotation.

Article Title: Convergent recombination cessation between mating-type genes and centromeres in selfing anther-smut fungi
Article Snippet: .. Contigs were aligned with optical maps of the two mating-type chromosomes obtained previously , with MapSolver software (OpGen); see statistics on assemblies in Supplemental Tables S1 and S2 . ..

Article Title: Convergent recombination cessation between mating-type genes and centromeres in selfing anther-smut fungi
Article Snippet: .. Contigs were aligned with optical maps of the two matingtype chromosomes obtained previously (Hood et al. 2015), with MapSolver software (OpGen), allowing generating oriented a1 and a2 pseudomolecules for each mating type chromosome. ..

Article Title: Complete Genome Sequence of Simiduia agarivorans SA1 T , a Marine Bacterium Able To Degrade a Variety of Polysaccharides
Article Snippet: .. The assembly was finished by scaffolding the contigs on the optical map using the MapSolver software (OpGen). ..

Article Title: Whole-genome sequence data and analysis of Lactobacillus delbrueckii subsp. lactis ACA-DC 178 isolated from Greek Kasseri cheese
Article Snippet: .. The alignment between the assembly and the optical map was performed with the MapSolver software (OpGen Technologies, Inc., Madison, WI). ..

Article Title: A 20‐kb lineage‐specific genomic region tames virulence in pathogenic amphidiploid Verticillium longisporum
Article Snippet: .. Optical maps of Vl32 and Vl43 were generated and visualized by OpGen using the Mapsolver software (OpGen). ..

In Silico:

Article Title: Genome Mapping in Plant Comparative Genomics.
Article Snippet: Genomemapping produces fingerprints of DNA sequences to construct a physical map of the whole genome.. It provides contiguous, long-range information that complements and, in some cases, replaces sequencing data.. Recent advances in genome-mapping technology will better allow researchers to detect large (>1 kbp) structural variations between plant genomes.

Sequencing:

Article Title: Genome Mapping in Plant Comparative Genomics.
Article Snippet: Genomemapping produces fingerprints of DNA sequences to construct a physical map of the whole genome.. It provides contiguous, long-range information that complements and, in some cases, replaces sequencing data.. Recent advances in genome-mapping technology will better allow researchers to detect large (>1 kbp) structural variations between plant genomes.

Article Title: Whole-genome sequence data and analysis of Lactobacillus delbrueckii subsp. lactis ACA-DC 178 isolated from Greek Kasseri cheese
Article Snippet: .. How data were acquired , Genome sequencing: Illumina HiSeq 2000 (Illumina, CA), Denovo sequence assembly: SOAPdenovo v.2.04 software, MapSolver software (OpGen Technologies, Inc., Madison, WI), Bioinformatics approaches: Rapid Annotation using Subsystem Technology (RAST) v.2.0, Prodigal, MetaGeneAnnotator, FGENESB, GenePRIMP pipeline, eggNOG-mapper v.4.5, IslandViewer 4, CRISPRFinder. .. Data format , Raw sequence reads and genome assembly and annotation.

RAST Test:

Article Title: Whole-genome sequence data and analysis of Lactobacillus delbrueckii subsp. lactis ACA-DC 178 isolated from Greek Kasseri cheese
Article Snippet: .. How data were acquired , Genome sequencing: Illumina HiSeq 2000 (Illumina, CA), Denovo sequence assembly: SOAPdenovo v.2.04 software, MapSolver software (OpGen Technologies, Inc., Madison, WI), Bioinformatics approaches: Rapid Annotation using Subsystem Technology (RAST) v.2.0, Prodigal, MetaGeneAnnotator, FGENESB, GenePRIMP pipeline, eggNOG-mapper v.4.5, IslandViewer 4, CRISPRFinder. .. Data format , Raw sequence reads and genome assembly and annotation.

Hood:

Article Title: Convergent recombination cessation between mating-type genes and centromeres in selfing anther-smut fungi
Article Snippet: .. Contigs were aligned with optical maps of the two matingtype chromosomes obtained previously (Hood et al. 2015), with MapSolver software (OpGen), allowing generating oriented a1 and a2 pseudomolecules for each mating type chromosome. ..

other:

Article Title: Whole Genome Sequencing and Tn 5 -Insertion Mutagenesis of Pseudomonas taiwanensis CMS to Probe Its Antagonistic Activity Against Rice Bacterial Blight Disease
Article Snippet: The paired-end raw reads of Illumina were trimmed to remove linkers and adaptors and further assembled by CLC Genomic Workbench (4.0.2).

Scaffolding:

Article Title: Complete Genome Sequence of Simiduia agarivorans SA1 T , a Marine Bacterium Able To Degrade a Variety of Polysaccharides
Article Snippet: .. The assembly was finished by scaffolding the contigs on the optical map using the MapSolver software (OpGen). ..

Generated:

Article Title: A 20‐kb lineage‐specific genomic region tames virulence in pathogenic amphidiploid Verticillium longisporum
Article Snippet: .. Optical maps of Vl32 and Vl43 were generated and visualized by OpGen using the Mapsolver software (OpGen). ..



Similar Products

90
OpGen Inc mapsolver software
Mapsolver Software, supplied by OpGen Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/mapsolver+software/mapsolver+software/pmc03569288-19-14-16
Average 90 stars, based on 1 article reviews
mapsolver software - by Bioz Stars, 2026-11
90/100 stars
  Buy from Supplier

90
OpGen Inc opgen mapsolver software
Opgen Mapsolver Software, supplied by OpGen Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/mapsolver+software/mapsolver+software/pmc03556328-195-15-14
Average 90 stars, based on 1 article reviews
opgen mapsolver software - by Bioz Stars, 2026-11
90/100 stars
  Buy from Supplier

Image Search Results